Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909565.1_cds_XP_016459755.1_53249
CDS Infomation

[gene=LOC107783296] [db_xref=GeneID:107783296] [protein=zinc finger protein ZPR1-like] [protein_id=XP_016459755.1] [location=join(15976..16107,16708..16752,17190..17230,17331..17412,18933..18977,19213..19269,19604..19663,19767..19894,21194..21461,21537..21603,22486..22556,22633..22722,27548..27656,28092..28183,28529..28634,29199..29323)] [gbkey=CDS]
Sequence

ATGACGGGGGCTAAGGAACAGATAATGGATGTTCGGTCGGTGGTGGAAGCAGTAACAGCC
GCCGGAGATGATGTTGAGATTGATACTCCTCTCTATGTCGTTGAAAGCCTCTGTATGCGC
TGTGGTGACAATGGTACAACAAGGTTTCTCTTAACACTGATTCCACATTTTAGGAAGATA
TTATTGTCAGCATTTGACTGTCCCCATTGTGGTGAAAGAAATAATGAAGTGGAGTTCGCT
GGTGAGATTCAGCCTCGAGGATGTTGCTATAGCTTGCATGTTCCATCTGGTGATCAAAAG
ATGCTCGACAGAACAGTTGTGAAGTCTGAAAGTGCTACCATCAAGATCCCTGAACTGGAT
TTTGAGATCCCCCCCGAAGCTCAGCGTGGATCATTGTCAACGATAGAAGGCATACTGGTT
CGAGCTGCCGACGGTTTGGAGGCCCTTCAAGATGAACGGAAGAAAGTGGATCCCCAGATG
GCTGAAGCAATAGATCGGTTCTTGATAAAACTGAGAGCTTGTGCTTCAGGAGATTCATCC
TTTACTTTCATTCTTGATGATCCTGCTGGTAACAGCTTTATTGAGAACCCGCTAGCTCCA
TCTCCTGATCCCTCATTGAAAATCACATTCTATGAGCGAACTCCTGAACAACAGGCAGCT
TTAGGGTATCTTGCGGACCCATCACAGGTTGGAGGACAAAGGGATGAGGTATCAACTGAG
GGGATAAATAATGTTCCTCATCACCTGCTAAAGGAACCACATGGATCAGTTGGAGCGAGA
GCAGGACGTCAGGCTATTGCTCAGGGTAACAGTGCAGAAATAGCTGAAGCTCTATTTCGA
TATTCAGCTCCTGAAGAGGTGATGATGTTTCCATCAACTTGTGGAGCATGCGCTGCGAGT
TGTGACTGTAGAATGTTTATTACCAATATTCCATACTTTCAAGAAGTAATAGTTATGGCA
TCCTCTTGTGATGCTTGTGGTTATCGCAACTCTGAGCTGAAACCTGGTGGTCCTATATCT
GATAAGGGAAAGAAAATTAAGCTTCATGTGGAAAACATTAAAGACTTGAGCCGTGATGTG
ATTAAGTCTGATAGTGCTGGAGTGGAAATTCCTGAGCTTGAGTTAGAGCTTGCTAGCGGC
ACTTTGGGTGGAATGGTGACGACAGTTGAGGGTCTAATCACAAAAATTAGCGAAAGTCTT
GAGAGAGTACATGGATTCACATTTGGAGACAGTCTTGATGAAGACAGGAAGAGCAAGTGG
TTGGATTTCCGAGCAAGACTAGACAAGCTTTTGAGCTTGGGACAACCGTGGACATTGATC
ATCGACGATGCACTTTCAAATTCTTTTGTTGCACCTGCAACCGATGATATCAAGGATGAC
AAACAGTTAACATTTGAAGAGTACGTAAGATCGTGGGAGCAAAACGAGGAGTTGGGTCTT
AATGACATGGACACCACCTCAGCTGATGCTGCTTACAGTTCAGCAGATGTTGCACCCAGT
GAGAGAGCTGACAATTGA

Peptide Sequence

PEP ID

XP_016459755.1
PEP Infomation

PREDICTED: zinc finger protein ZPR1-like [Nicotiana tabacum]
Sequence

MTGAKEQIMDVRSVVEAVTAAGDDVEIDTPLYVVESLCMRCGDNGTTRFLLTLIPHFRKI
LLSAFDCPHCGERNNEVEFAGEIQPRGCCYSLHVPSGDQKMLDRTVVKSESATIKIPELD
FEIPPEAQRGSLSTIEGILVRAADGLEALQDERKKVDPQMAEAIDRFLIKLRACASGDSS
FTFILDDPAGNSFIENPLAPSPDPSLKITFYERTPEQQAALGYLADPSQVGGQRDEVSTE
GINNVPHHLLKEPHGSVGARAGRQAIAQGNSAEIAEALFRYSAPEEVMMFPSTCGACAAS
CDCRMFITNIPYFQEVIVMASSCDACGYRNSELKPGGPISDKGKKIKLHVENIKDLSRDV
IKSDSAGVEIPELELELASGTLGGMVTTVEGLITKISESLERVHGFTFGDSLDEDRKSKW
LDFRARLDKLLSLGQPWTLIIDDALSNSFVAPATDDIKDDKQLTFEEYVRSWEQNEELGL
NDMDTTSADAAYSSADVAPSERADN

Transcript Sequence

Gene sequence data has not been registered.